Research Article
Evaluation of Biocontrol Agent Bacteria Potential as a Plant Growth Promoting Rhizobacteria
Mohammad Hailmi Sajili1, Tajul Afif Abdullah1*, Zakry Fitri Ab Aziz2, Zaiton Sapak3, Siti Aishah Abu Bakar1, Muslianie Md Isa1 and Nor Azi Asminda Johari1
1School of Agriculture Biotechnology, Faculty of Bioresource and Food Industry, University Sultan Zainal Abidin, Terengganu, Malaysia; 2Department of Crop Science, Universiti Putra Malaysia Sarawak, Jalan Nyabau, 97008 Bintulu, Sarawak, Malaysia; 3Faculty of Plantation and Agrotechnology, Universiti Teknologi MARA Melaka Branch Jasin Campus, 77300 Merlimau, Melaka, Malaysia.
Abstract | Plant growth-promoting bacteria (PGPB) are usually associated with many plant species such as Carica papaya and are commonly present in many environments. The PGPR group was the most widely studied group of PGPB (Bashan and Gonzalez, 1999). This group of bacteria usually colonises the root surfaces and the closely adhering soil interface, the rhizosphere. This study aimed to isolate and screen effective bacteria from the papaya plant’s rhizosphere and evaluate their potential as plant growth-promoting rhizobacteria (PGPR). Bacteria were isolated from 12 places in Peninsular Malaysia in which the samples were collected from each place from the papaya tree’s rhizosphere soil Four isolates which is BK03, BK04, MKB04 and MKB 10 were chosen from total 12 isolates and undergo 6 test which were antibiotic test, casein hydrolysis test, oxidase test, Indole-3-Acetic Acid (IAA) Production Test, P-solubility Test and Nitrogen Fixing Activity Test. Isolates of MKB04 and MKB 10 were found to be resistant to all antibiotics tested and all four isolates demonstrate the ability to transform nitrogen to fix nitrogen. Isolates MKB04 and MKB10 were identified as Pseudomonas aeruginosa, BK03 as Bacillus cereus and BK04 as Bacillus atraphaeus. Only Pseudomonas aeruginosa produces hydrolytic enzymes and stimulate plant growth directly by nitrogen fixation, solubilisation of phosphate, and indole acetic acid (IAA) production compared to Bacillus cereus and Bacilllus atrophaeus. In greenhouse study B. cereus, P. aeruginosa and consortium consist of the mixture of MKB10, BK03 and BK04. showed a significant seed germination, shoot and root length of Carica papaya seedling. Consortium of Bacillus cereus, Bacillus atraphaeus and Pseudomonas aeruginosa showed a significant number of Carica papaya leaves and root length after 1 month in the greenhouse.
Received | May 13, 2025; Accepted | Jul 21, 2025; Published | May 01, 2026
*Correspondence | Tajul Afif Abdullah, School of Agriculture Biotechnology, Faculty of Bioresource and Food Industry, University Sultan Zainal Abidin, Terengganu, Malaysia; Email: [email protected]
Citation | Sajili, M.H., T.A. Abdullah, Z.F.A. Aziz, Z. Sapak, S.A.A. Bakar, M.M. Isa and N.A.A. Johari. 2026. Evaluation of biocontrol agent bacteria potential as a plant growth promoting rhizobacteria. Sarhad Journal of Agriculture, 42(2): 738-746.
DOI | https://dx.doi.org/10.17582/journal.sja/2026/42.2.738.746
Keywords | Carica papaya L, Percentage of inhibition radial growth (PIRG), Bacillus cereus, Bacillus atraphaeus, Pseudomonas aeruginosa, Consortium
Copyright: 2026 by the authors. Licensee ResearchersLinks Ltd, England, UK.
This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Introduction
Beneficial microorganism application as biological control is a promising disease management strategy that aligns with Integrated Pest Management (IPM) principles and promotes ecological sustainability (Collinge et al., 2022). Plant Growth-Promoting Rhizobacteria (PGPR), naturally occurring soil bacteria, can help suppress plant diseases by producing antibiotics, inducing systemic resistance, and competing with pathogens for nutrients and space (Lugtenberg and Kamilova, 2009). The study on the potential of bacteria as plant growth in Malaysia was raised recently. Some literature discusses the potential use of bacteria to stimulate plant growth and manage soil and plant health (Ismail et al., 2016; Welbaum et al., 2009). Plant growth-promoting bacteria (PGPB) are usually associated with many plant species and are commonly present in many environments. The PGPR group was the most widely studied group of PGPB (Bashan and Gonzalez, 1999). This group of bacteria usually colonises the root surfaces and the closely adhering soil interface, the rhizosphere (Kloepper et al., 1999). As reported by (Gray and Smith, 2005), some of these PGPR can also enter root tissue and establish as beneficial endophytic bacteria (Gray and Smith, 2005). Many can transcend the endodermis barrier, crossing from the root cortex to the vascular system, and subsequently thrive as endophytes in stems, leaves, tubers, and other organs (Beneduzi et al., 2012; Compant et al., 2005).
Consequently, intimate associations between bacteria and host plants can be formed without harming the plant (Beneduzi et al., 2012; Compant et al., 2005). Actinomycetes, Bacillus, Pseudomonas, Alcaligenes, Trichoderma and non-pathogenic Fusarium spp. are the most crucial group of effective microbes (Compant et al. 2005). Beneduzi et al. (2012) reported that Bacillus species are the most common type of bacteria isolates in soil samples and can account for up to 36% of the bacterial populations.
Materials and Methods
Screening for effective bacteria
Bacteria was isolated from 12 places in Peninsular Malaysia as in Table 1. Source of 5 bacteria samples were collected from each place from the papaya tree’s rhizosphere soil with 30cm diameter in length. Effective microbes were isolated using the ten-fold serial dilution technique. 1 gram of the soil was added to 90 ml sterile distilled water in 250 ml flasks and rotary shaken for 30 min at 150 rpm (Johnson and Curl, 1972). The plating was carried out using the spread technique, where 0.1 ml suspension was spread over the surface of the nutrient agar media in a Petri disk using an L-shaped glass rod. The plates were incubated at 28 ± 2°C for 24 hours to isolate bacteria, 5-10 days on nutrient agar and 7-14 days for fungi on PDA. Representative colonies growing on plates were selected, isolated and transferred to the same source media. The selected isolates were given codes. The bacterial strains were stored at -20°C in 20% glycerol.
Table 1: Location of isolated bacteria for screening of effective bacteria as biocontrol agent for controlling fungus
|
Sample No. |
Location |
Sources |
Isolates |
|
|
BK 01 - BK 05 |
TKPM, Gajah Mati, Pokok Sena, KEDAH |
Rhizosphere soils |
5 |
|
|
BPP 01 – BPP 03 |
Sungai Bakau, Nibong Tebal, PULAU PINANG |
Rhizosphere soils |
3 |
|
|
BPR 01 – BPR 08 |
Sungai Jambu, Selama, PERAK |
Rhizosphere soils |
8 |
|
|
BM 01 - BM 07 |
Paya Lebar, Ramuan Cina Besar, MELAKA |
Rhizosphere soils |
7 |
|
|
BM 08 – BM 13 |
Pengkalan Balak, MELAKA |
Rhizosphere soils |
6 |
|
|
BN 01 – BN 04 |
Rantau, NEGERI SEMBILAN |
Rhizosphere soils |
4 |
|
|
BPH 01 - BPH 05 |
Kuala Lipis, PAHANG |
Rhizosphere soils |
5 |
|
|
UniSZA 1 – UniSZA 5 |
Gong Badak, Kuala Terengganu, TERENGGANU |
Rhizosphere soils |
5 |
|
|
UniSZA 6 - UniSZA 8 |
Gong Medang, Besut, TERENGGANU |
Rhizosphere soils |
3 |
|
|
MKB 01 - MKB 05 |
UPM, Serdang, SELANGOR |
Rhizosphere soils |
5 |
|
|
MKB 06 – MKB 07 |
Ijok, Selangor |
Rhizosphere soils |
2 |
|
|
MKB 06 - MKB 13 |
Cheras Perdana, KUALA LUMPUR |
Rhizosphere soils |
8 |
|
A preliminary screening for potentially effective microbes against Corynespora. cassiicola and showed that from the 61 isolates tested, only 16.67% (10 isolates) showed antagonistic activity towards C. cassiicola. The remaining 51 isolated bacteria had no antagonist activity and were low to measure. Then, 10 isolates were done to screen the antagonist test further to get the exact value of percentage of inhibition radial growth (PIRG). There were 4 isolated recorded PIRG values below 50%, BPP3, MKB8, and UniSZA 2; the lowest PIRG value was recorded by BPR04 (8.89%). 2 other isolates recorded PIRG values over 50%, which were BM10 (55.09%) and UniSZA 1 (62.27%). Of the 10 isolates, 4 showed very high antagonistic activity with percentage of inhibition radial growth (PIRG) values of over 80% and were selected for these study. All the 4 isolates (BK03, BK04, MKB04 and MKB10) were tested with antibiotic test, casein hydrolysis test, oxidase test, indole-3-acetic acid (IAA) production test, P-solubility test and nitrogen fixing activity. The four bacterial isolates were then tested on Carica papaya plant to test its (i) Effect of Bacteria on Papaya Seeds Germination and (ii) Effect of Bacteria on Plant Growth (Glasshouse Trial).
Antibiotic test on bacteria
The pure culture of bacteria was aseptically emulsified in the Mueller-Hinton Broth (MHB) until the turbidity of MHB visually matched that of the standard turbidity of the McFarland solution. Sterile cotton swabs were dipped into the broth culture and lawn the bacteria by streaking onto a Mueller-Hinton Agar (MHA) plate. After that, the antibiotic discs were placed onto the surface of the agar by using sterile forceps and incubated at 30°C for 24 hours. After incubation, the susceptibility results produced by the bacteria were observed, and the diameter of the inhibition zone for each antibiotic was measured using a ruler. The measurement was compared to the standard table to determine the bacterial sensitivity or resistance to the antibiotic tested.
Casein hydrolysis test on bacteria
The bacterial strains were prepared for overnight culture in nutrient agar plates at four quadrants and incubated at 30°C for 24 hours. Casein media were autoclaved. Then, the media were dispensed in a petri dish, and after the media solidified, the bacteria overnight culture was streaked at the centre of the plate in a straight line. The plate was incubated at 30°C for 24 hours. Each bacteria tested was observed for hollow and transparent zones around the colony.
Oxidase test
The production of a purple colour within 10 seconds was recorded as positive, its development in 10-60 seconds was delayed positive, and the absence of colouration or its later development was negative. The filter paper was soaked with the substrate tetramethyl-p-phenylenediamine dihydrochloride. Then, moisten the paper with sterile distilled water. Pick the colony to be tested with a loop and smear it onto the filter paper. The observation was done on the inoculated area of the paper. Production of a purple colour within 10 seconds was recorded as positive, its development in 10-60 seconds as delayed positive, and the absence of colouration or its still later development as negative (Steel, 1961).
Indole-3-acetic acid (IAA) production test
Indole-3-Acetic Acid (IAA) activity was determined by centrifuging 72-hour-old cultures at 3,000 rpm for 30 minutes. Subsequently, 2 mL of supernatant was mixed with two drops of 0.1 ml orthophosphoric acid and 4 ml of Salkowski reagent (the mixture of 50 mL of 35% sulphuric acid, H2SO4 and 1 ml of 5M Iron (III) chloride, FeCl3 solution). Then, the mixtures were incubated in the dark for 30 minutes. IAA production was indicated by the development of pink colour (Ismail et al., 2016; Mat Amin et al., 2010).
P-solubilising activity
The P-solubilising activity was determined by spot inoculated the respective isolates on National Botanical Research Institute’s Phosphate (NBRIP) agar medium (g/l): glucose: 10g; tricalcium phosphate: 10g; MgCl2.6H2O: 5g; MgSO4.7H2O: 0.25g; KCl: 0.2g; (NH4)2SO4: 0.1; bacto agar: 15g.) incubated for 5-10 days at 28±2°C. The formation of a clear zone indicates that the P-solubilising activity is positive (Ismail et al., 2016; Mat Amin et al., 2010).
Nitrogen-fixing activity (Qualitative Assay)
Nitrogen-fixing (qualitative assay) was identified using the following methods (Park et al., 2005). The Burk’s nitrogen-free agar media (10 g glucose, 0.41 g KH2PO4, 0.52 g K2HPO4, 0.05 g Na2SO4, 0.2 g CaCl2, 0.1 g MgSO4·7H2O, 0.005 g FeSO4·7H2O, 0.0025 g Na2MoO4·2H2O, 1.8 g agar) were prepared (all per litre distilled water) for semi-solid, and 15 g agar for solid medium was used throughout the study (Wilson and Wisniewski, 1989). Adjust the pH of the media to 7.0±0.1. Autoclave at 121°C for 15 minutes. Pour the media into a test tube and let it cool. Grow the isolate into the agar by using a sterilised inoculation loop. Incubate at 28±2°C for 24-72 hours. The isolates will be characterised as nitrogen-fixing bacteria based on pellicle formation.
Effect of bacteria on papaya seeds germination
The bacteria were tested on papaya seedlings to determine plant growth-promoting potential after inoculation. The papaya seeds were soaked in 95% ethanol for 5 minutes and then soaked in 5.25% sodium hypochlorite for 30-60 minutes, followed by 6 times washed with sterile distilled water for surface sterilisation before seed inoculation. (Ismail et al., 2016; Mat Amin et al., 2010). The inoculation treatments were as follows: Uninoculated control (soaked in sterile distilled water and served as a control), Isolate MKB04, Isolate MKB10, Isolate BK03, Isolate BK04 and consortium (Mix of MKB04 + MKB10 + BK3 + BK4). Plant bioassay screening was established using the growth pouch method (GPM). To help break seed dormancy, the seeds were immersed in warm (about 40°C) sterile distilled water for 2 hours. Subsequently, the seeds were placed between 2-layer tissue paper and moistened with sterile distilled water for germination. After 9 days, the germinated seeds were undergone for inoculation. The inoculation was made by soaking the germinated seeds for 2 hours in respective bacterial inoculants, each isolate with more than 108 colony-forming units (CFU) per ml. Growth pouches were held upright. Each growth pouch contained 2 layers of paper towel, which were exposed to UV light before insertion into the growth pouch. The germinated seeds with respective treatments were transplanted into the growth pouches and arranged in a completely randomised design with three replications under laboratory conditions (Ismail et al., 2016; Mat Amin et al., 2010).Daily monitoring and watering of seeds in growth pouches were conducted. After 26 days of inoculation, harvesting and data collection were conducted. Data collections were root length (cm), root dry weight (mg), shoot length (cm), shoot dry weight (mg). Data on plant growth parameters were analysed for variance, and a mean comparison was made using Duncan’s Multiple Range Test at a 95% significance level. The statistical analysis used the Statistical Analysis System (SAS) version 9.3.
Effect of bacteria on plant growth (Glasshouse Trial)
Ten replicates for each treatment of 3 weeks of homogenous papaya seedlings were planted in the polybag (12’ x 8’) containing a 3:2:1 soil mixture. 5 ml of bacteria solution for each treatment with 5g of NPK green was poured into the seedlings at a second. Followed by 5 ml bacteria solution with 5g of NPK green on day 7th and 3rd application on day 14th. For treatment 1 is bacteria solution (P. aeruginosa), treatment 2 (B. cereus), treatment 3 (B. atrophaeus) and treatment 4 is consortium, which is mix of all 3 bacteria solution (P. aeruginosa + B. cereus + B. atrophaeus). As for control the papaya tree were just fertilized with 5g of NPK Green with nutrient broth. The seedlings were watered daily and left in the glasshouse for 1 months. The leaf number and the height of the seedlings were measured every week. The polybags were arranged randomly in the greenhouse. An experiment was conducted on CRD experimental design. After 1 months, the seedlings were cut into specific part which is leaf, stem and roots. The soil was removed by soaking the polybag in the water to loosen the soil from the roots. All parts were then dried in the oven with 60 °C of temperature for 60 hours. The dry weight of all parts was recorded and analysis.
Results and Discussion
Screening of plant growth-promoting properties of four effective bacteria
Antibiotic test on bacteria
All 4 effective bacteria tested on six antibiotics that were CEC30, D10, ENR5, CN10, TE30 and AMC30 (Table 2). Bacteria BK04 was resistant to the CEC30 but susceptible to all other antibiotics. Meanwhile, BK03 were resistant to CEC30 and D10 and susceptible to ENR05, CN10 and AMC30. MKB10 and MKB04 show the same result, which is resistant to all antibiotics except ENR5 and CN10.
Table 2: Test of several antibiotic resistant on four effective bacteria
|
CEC 30 |
D 10 |
ENR 5 |
CN 10 |
TE 30 |
AMC 30 |
|
|
BK04 |
R |
S |
S |
S |
S |
S |
|
BK03 |
R |
R |
S |
S |
R |
S |
|
MKB10 |
R |
R |
S |
S |
R |
R |
|
MKB04 |
R |
R |
S |
S |
R |
R |
*R = Resistant, S = Susceptible
Chemical test on bacteria
Several chemical tests were done to screen the bacteria’s potential as a plant growth promoter ability. MKB04 and MKB10 were rod-shaped bacteria, with both being gram-negative. Both also appeared with yellow-green bacteria without odour and were considered very fast-growing bacteria; meanwhile, BK03 and BK04. For the casein hydrolysis test, all 4 bacteria, MKB04, MKB10, BK03, and BK04, showed positive results (Table 3) in exoenzyme cases. It was proved by producing a zone of proteolysis surrounding the colony on skim milk agar (Figure 1).
An oxidase test was conducted, and again MKB04 and MKB10 were positive, which produced cytochrome oxidase, and BK03 and BK04 were negative. Bacteria colonies with clear zones on NBRIP agar medium plates indicate their ability to solubilise phosphate (Figure 2). The result of this test shows that MKB04 and MKB10 were positive, while BK03 and BK04 were negative. The nitrogen-fixing test proved the ability of all four bacteria to transform nitrogen into fixed nitrogen.
Table 3: Chemical tests on 4 effective bacteria
|
Tests |
MKB04 P. aeruginosa |
MKB10 P. aeruginosa |
BK04 B. atrophaeus |
BK03 B. cereus |
|
Cell Shape |
Rod |
Rod |
Rod |
Rod |
|
Gram reaction |
-Ve |
-Ve |
+Ve |
+Ve |
|
Colour |
Yellow-green |
Yellow-Green |
White |
White |
|
Odour |
No |
No |
Odour |
Odour |
|
Grow |
Very fast |
Very fast |
Very fast |
Very fast |
|
Casein hydrolysis |
+ve |
+ve |
+ve |
+ve |
|
Oxidase |
+ve |
+ve |
-ve |
-ve |
|
IAA |
-ve |
-ve |
-ve |
-ve |
|
Solubilise P |
+ve |
+ve |
-ve |
-ve |
|
N Fixing |
+ve |
+ve |
+ve |
+ve |
Positive reaction: +ve. Negative reaction: -ve R: Resistant S: Susceptible aVery fast colonies appeared after 24 hours incubation. Fast colonies appeared after 48 hours of incubation. Slow colonies appeared after 72 hours of incubation. + = positive; - = negative
Test on P-Solubilise and N-Fixing were important characters for that purpose. In N-Fixing tests, all bacteria tested were favourable to this test. It was a good sign of the potential of MKB10, MKB04, BK03 and BK04 as plant PGPB (Figure 3). It was consistent with the report by (Banerjee et al., 2014), which mentioned several free-living bacteria can also fix nitrogen and provide it to plants. One PGPB element was fulfilled. Inoculation of plants with PGPB enhances the assimilation of essential nutrients and plant-associated biological nitrogen fixation (Bashan et al., 2014). Using nitrogen-fixing microorganisms and plant growth-promoting bacteria (PGPB) is a necessary alternative to chemical fertilisers for the cultivation of agricultural plants (Katiyar, 2016; Premachandra et al., 2016). Nitrogen is one of the three macronutrients required for high crop yields. Three-quarters of our atmosphere consists of nitrogen gas. Elemental nitrogen must be transformed into usable forms before it is available for plant uptake. Nitrogen is the major component of chlorophyll, which plays a vital role in photosynthesis (Premachandra et al., 2016; Katiyar et al., 2016). Certain microbes can convert atmospheric nitrogen into utilisable forms of nitrogen for themselves and plants via biological fixation (J. Kim and Rees, 1994). As the second most important plant growth-limiting nutrient after nitrogen, Phosphorus (P) is a crucial element for the survival of most organisms, including plants (Premachandra et al., 2016). The amount of phosphorus in the soil is generally relatively high, but most of this is insoluble, so it is not available to support plant growth (Bianco and Defez, 2010). Two (MKB04 and MKB10) out of four bacteria tested showed potential as P-solubilise bacteria, and two others showed negative results. Much of the soluble inorganic phosphorus applied as chemical fertiliser is immobilised, then unavailable to plants and wasted (Bianco and Defez, 2010; Khan et al., 2007). The insoluble phosphorus is present as an inorganic mineral such as apatite or as one of several organic forms, including inositol phosphate (soil phytate), phosphomonoester, or phosphodiester (Khan et al., 2007). Much of the soluble inorganic phosphorus used as chemical fertiliser is immobilised soon after it is applied, making it unavailable to plants and waste. It has been suggested that PGPB may help plants overcome abiotic stresses by providing them with IAA (Katiyar, 2016). Meanwhile, all tested bacteria (MKB10, MKB04, BK03 and BK04) didn’t produce IAA or were too low to measure (Figure 4). After all, plant cells secreted, taken, and transported the bacterially produced IAA. Together with the plant’s pool of IAA, it stimulates an auxin signal transduction pathway, including various auxin response factors. Consequently, plant cells grow and proliferate. A glass house study proved that MKB10, MKB04, BK04, BK03 and Consortium show the potential to increase papaya’s growth rate, except for B. atrophaeus. With a 30% growth rate compared to control on consortium, there was a significant increment in plant growth.
Effect of bacteria on papaya seeds germination and shoot production
The effective bacteria tested have different effects on C. papaya seeds. MKB10, BK04 and consortium show an influence on the seed germination process. Consortium shows the most extended shoots followed by MKB10 with 6.98 cm and 6.68 cm, respectively (Table 4), with no significant difference. BK04 then followed it with 6.16 cm, then followed by Control with a significant difference (p<0.05). Meanwhile, no seeds were germinated on BK03. Thus, the percentage of germination was higher in the consortium, with 90% germination, followed by control with 85% and then 80% of MKB10. Meanwhile, no germination was recorded on BK04 (Figure 5).
Table 4: Effect of bacteria on shots and roots length 25th days
|
Treatment |
Seeds Germination (%) |
Shoots Length (cm) |
Root Length(cm) |
|
Control |
85 |
1.48c |
0.30c |
|
MKB10 |
80 |
6.66a |
2.92a |
|
BK03 |
70 |
6.16b |
2.46b |
|
BK04 |
0 |
0d |
0c |
|
Consortium |
90 |
6.98a |
3.20a |
Table 5: Effect of bacteria on growth of C. papaya seedlings in different bacteria treatment
|
Treatment |
Stem |
Leaf |
Root |
Total dry weight (g) |
|||||
|
Height (cm) |
Dry weight (g) |
Number (mean) |
Dry weight (g) |
Length (cm) |
Dry weight (g) |
||||
|
Control |
23.60b |
2.54b |
9.20c |
2.38c |
19.90d |
3.44b |
8.36b |
||
|
P. aeruginosa |
26.50a |
3.30a |
10.00b |
3.12ab |
26.00b |
4.90a |
10.78a |
||
|
B. cereus |
22.90b |
2.60b |
10.40b |
3.26a |
24.40bc |
4.78a |
10.64a |
||
|
B. atrophaeus |
25.90a |
3.24a |
10.80b |
2.66bc |
23.86bc |
3.90b |
9.8b |
||
|
Consortium |
26.10a |
2.72b |
11.60a |
3.30a |
29.80a |
4.90a |
10.92a |
||
*Consortium = Mixture of MKB10, BK03 and BK04.
Effect of bacteria on papaya seedling growth
Effective bacteria were confirmed to influence the growth of Carica papaya seedlings. Three treatments show the ability of the bacteria to increase plant growth (stem high) with significant differences (p<0.05) compared to the control (Table 5). The highest was recorded on P. aeruginosa with 26.50 cm, followed by the consortium and B. cereus. The lowest was on B. aethropus with only 22.90 cm. Meanwhile, on dry stem weight, P. aeruginosa recorded the highest with 3.30g and the weakest on control with 2.54.
The number of leaves on the treated plant was significantly higher than the control. The consortium recorded the greatest number of leaves with significant differences (p<0.05) to three other treatments, which were P. aeruginosa, B. atrophaeus and B. cereus. Consortium shows the highest number of leaves, with 11.60, but it is insignificant for P. aeruginosa and B. cereus. Regarding the dry weight of leaves, the three treatments significantly differ from the control. Consortium recorded the highest with 3.30 g, followed by B. cereus with 3.26g with no significant difference (p>0.05). The lowest was control, followed by B. atrophaeus, the second lowest with no significant difference. The influence of effective bacteria on root boosters was also tested. On root length, all 4 treatments were significantly different from the control. The longest was recorded at consortium with 29.80 cm. B. atrophaeus recorded the shortest length among treatments at 23.86 cm and B. cereus at 24.40 cm, with no significance among them. Regarding the dry weight of C. papaya roots, there is no significant difference between the three treatments: Consortium, P. aeruginosa and B. cereus as root boosters. Thus, B. atrophaeus seemed to have no effect of plant booster on C. papaya as B. atrophaeus has no significant difference compared to the control. Meanwhile, on the total dry weight (stem, leaf, and roots) of C. papaya, the best growth performance was shown by Consortium, followed by P. aeruginosa and B. cereus. Still, there was no significant difference between them (Figure 6).
Conclusions and Recommendations
In conclusion, nitrogen and phosphorus are key elements for the growth and metabolism of plants. All bacteria were N-fixing and P-solubilised. So, Pseudomonas aeruginosa, Bacillus cereus, Bacillus atrophaeus and its consortium were proven as potential PGPB The in vitro performance of two isolates (MKB04) and (MKB10) were identified as Pseudomonas aeruginosa, produces hydrolytic enzymes and stimulate plant growth directly by nitrogen fixation, solubilisation of phosphate, and indole acetic acid (IAA) production compared to Bacillus cereus and Bacilus atrophaeus. Pseudomonas aeruginosa and B. cereus and consortium were proven as potential PGPB by greenhouse study with significant difference (p<0.05) compared to the control.
Acknowledgements
This research was supported by Universiti Sultan Zainal Abidin (UniSZA) through a DPU 1.0 Grant (UniSZA/2021/ DPU1.0/04) (R0308).
Novelty Statement
This study evaluates the potential of plant growth-promoting rhizobacteria (PGPR) of the effective bacteria isolated from the papaya plant’s rhizosphere located in 12 isolation point in Peninsular Malaysia . The findings of this research confirmed the P. aeruginosa as Plant Growth-Promoting Bacteria (PGPB) as mentioned by Stella Matthews and Halimi bin Mohd Saud, (2011).
Author’s Contribution
Mohammad Hailmi Sajili: Conducted the experiment and data collection.
Tajul Afif Abdullah: Checked the statistical analysis.Zakry Fitri Ab Aziz and Zaiton Sapak: Checked the method for the experiment.
Siti Aishah Abu Bakar and Nor Azi Asminda Johari: Proof read the article.
Muslianie Md Isa: Checked the grammatical errors.
Generative AI or AI assisted technology statement
The authors declare that no generative AI and AI assisted technology was used in the creation of this manuscript.
Conflict of interest
We have no conflicts of interest to disclose. All authors declare that they have no conflicts of interest.
References
Banerjee, A., S. Supakar and R. Banerjee. 2014. Melanin from the nitrogen-fixing bacterium Azotobacter chroococcum: A spectroscopic characterization. PLoS ONE., 9(1): 1–7. https://doi.org/10.1371/journal.pone.0084574
Bashan, Y. and L.E. Gonzalez. 1999. Long-term survival of the plant-growth-promoting bacteria Azospirillum brasilense and Pseudomonas fluorescens in dry alginate inoculant. Appl. Microbiol. Biotechnol., 51(2): 262–266. https://doi.org/10.1007/s002530051391
Beneduzi, A., A. Ambrosini and L.M.P. Passaglia. 2012. Plant growth-promoting rhizobacteria (PGPR): Their potential as antagonists and biocontrol agents. Genet. Molecul. Biol., 35(4): 1044–1051. https://doi.org/10.1590/S1415-47572012000600020
Bianco, C. and R. Defez. 2010. Improvement of phosphate solubilization and medicago plant yield by an indole-3-acetic acid-overproducing strain of Sinorhizobium meliloti. Appl. Environ. Microbiol., 76(14): 4626–4632. https://doi.org/10.1128/AEM.02756-09
Collinge, D.B., D.F. Jensen, M. Rabiey, S. Sarrocco, M.W. Shaw and R.H. Shaw. 2022. Biological control of plant diseases – What has been achieved and what is the direction? Plant Pathol., 71(5): 1024–1047. https://doi.org/10.1111/ppa.13555
Compant, S., B. Duffy, J. Nowak, C. Clément and E.A. Barka. 2005. Use of plant growth-promoting bacteria for biocontrol of plant diseases: Principles, mechanisms of action, and future prospects. Appl. Environ. Microbiol., 71(9): 4951–4959. https://doi.org/10.1128/AEM.71.9.4951-4959.2005
Gray, E.J. and D.L. Smith. 2005. Intracellular and extracellular PGPR: Commonalities and distinctions in the plant–bacterium signaling processes. Soil Biol. Biochem., 37(3): 395–412 https://doi.org/10.1016/j.soilbio.2004.08.030.
Ismail, F.S., M. Malahubban, M.H. Sajili and Z.F. Ab. Aziz. 2016. Plant growth-promoting properties of cultivable endophytic root nodule bacterial isolates from Acacia mangium Willd. Res. Plant Biol., 6: 14–18. https://doi.org/10.19071/ripb.2016.v6.3141
Johnson, L.F. and C.A. Curl. 1972. Methods for research on the ecology of soil-borne plant pathogens. Burgess Publishing Company pp.30-60
Katiyar, D. 2016. Plant growth promoting rhizobacteria-an efficient tool for agriculture promotion. Advan. Plants Agric. Res., 4(6): 426–434. https://doi.org/10.15406/apar.2016.04.00163
Khan, M.S., A. Zaidi and P.A. Wani. 2007. Role of phosphate-solubilizing microorganisms in sustainable agriculture—A review. Agron. Sustain. Develop., 27(1): 29–43. https://doi.org/10.1051/
Kim, J. and D.C. Rees. 1994. Nitrogenase and biological nitrogen fixation. Biochem., 33(2): 389–397. https://doi.org/10.1021/bi00168a001
Kloepper, J.W., R. Rodríguez-Kábana, G.W. Zehnder, J.F. Murphy, E. Sikora and C. Fernández. 1999. Plant root-bacterial interactions in biological control of soilborne diseases and potential extension to systemic and foliar diseases. Austral. Plant Pathol., 28(1): 21 https://doi.org/10.1071/AP99003.
Lugtenberg, B. and F. Kamilova. 2009. Plant-Growth-Promoting Rhizobacteria. Ann. Rev. Microbiol., 63(1): 541–556. https://doi.org/10.1146/annurev.micro.62.081307.162918
Mat Amin, N., H. Bunawan, R.A. Redzuan and J.B.S. Jaganath. 2010. Erwinia mallotivora sp., a new pathogen of papaya (Carica papaya) in Peninsular Malaysia. Int. J. Molecul. Sci., 12(1): 39–45. https://doi.org/10.3390/ijms12010039
Park, M., C. Kim, J.Yang, H. Lee, W. Shin, S. Kim and T. Sa. 2005. Isolation and characterization of diazotrophic growth promoting bacteria from rhizosphere of agricultural crops of Korea. Microbiol. Res., 160(2): 127–133. https://doi.org/10.1016/j.micres.2004.10.003
Premachandra, D., L. Hudek and L. Brau. 2016. Bacterial modes of action for enhancing of plant growth. J. Biotechnol. Biomat., 6(3):1–8. https://doi.org/10.4172/2155-952X.1000236
Steel, K.J. 1961. The oxidase reaction as a taxonomic tool. J. Gener. Microbiol., 25(2): 297–306. https://doi.org/10.1099/00221287-25-2-297
Welbaum, G.E., Z.X. Shen, J.I. Watkinson, C.I. Wang and J. Nowak. 2009. Priming soilless growing medium with disaccharides stimulated microbial biofilm formation, and increased particle aggregation and moisture retention during muskmelon transplant production. J. Americ. Soc. Hortic. Sci., 134(3): 387–395. https://doi.org/10.21273/JASHS.134.3.387
Wilson, C.L. and M.E. Wisniewski. 1989. Biological control of postharvest diseases of fruits and vegetables: An emerging technology. Ann. Rev. Phytopathol., 27: 425-441. https://doi.org/10.1146/annurev.py.27.090189.002233